Real-time PCR Testing Profiles
Real-time PCR testing for mouse, rat and other species.
PCRs can be performed through Real-time PCR testing for mouse, rat and other species. DCS (direct colony sampling), SFSB (sentinel free soiled bedding) and EDT (exhaust dust testing).
- Mouse
Opti-XXpress (DCS) - Rat
Opti-XXpress (DCS) - EDx Mouse
(EDT & SFSB) - EDx Rats
(EDT & SFSB) - Other Mouse
and Rat Panels - Other Species
- Individual PCR
Assays
Mouse Opti-XXpress
F - Feces | FS - Fur Swabs | DOS - Dry Oral Swabs
(Long: 125276703)
| Prevalent | Basic | Comprehensive | Global | FELASA Quarterly | FELASA Annual | Immunodeficient FELASA Quarterly |
Immunodeficient FELASA Annual |
|
|---|---|---|---|---|---|---|---|---|
| Test Code | 21-00273 | 21-00274 | 21-00275 | 21-00276 | 21-00349 | 21-00350 | 21-00351 | 21-00352 |
| Sample Type | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS |
|
Rodentibacter heylii/ pneumotropicus |
||||||||
| Mycoplasma pulmonis | ||||||||
| Staphylococcus aureus | ||||||||
|
Streptococcus β-hemolytic (Group A, B, C, G) |
||||||||
| Bordetella bronchiseptica | ||||||||
| Bordetella hinzii/pseudohinzii | ||||||||
| Corynebacterium kutscheri | ||||||||
| Streptobacillus moniliformis | ||||||||
| Streptococcus pneumoniae | ||||||||
| Filobacterium rodentium | ||||||||
|
Helicobacter spp. H.bilis, H.ganmani, H.hepaticus, H.mastomyrinus,H.rodentium, H.typhlonius |
||||||||
| Klebsiella oxytoca | ||||||||
| Klebsiella pneumoniae | ||||||||
| Salmonella spp. | ||||||||
| Citrobacter rodentium | ||||||||
| Clostridium piliforme | ||||||||
| Pseudomonas aeruginosa | ||||||||
| Campylobacter coli/jejuni | ||||||||
| Proteus mirabilis | ||||||||
| Corynebacterium bovis | ||||||||
| Corynebacterium spp. (HAC2) | ||||||||
| Staphylococcus xylosus | ||||||||
| Pneumocystis spp. | ||||||||
| Mouse hepatitis virus (MHV) | ||||||||
| Minute virus of mice (MVM) | ||||||||
| Mouse parvovirus (MPV1-5) | ||||||||
| Mouse norovirus (MNV) | ||||||||
|
Theiler's murine encephalomyelitis virus (TMEV) |
||||||||
| Mouse rotavirus (MRV/EDIM) | ||||||||
| Mouse adenovirus 1 (MAV1) | ||||||||
| Mouse adenovirus 2 (MAV2) | ||||||||
|
Mouse Kidney Parvovirus (MKPV) |
||||||||
| Reovirus 3 (REO3) | ||||||||
|
Pneumonia virus of mice (PVM) |
||||||||
| Sendai virus (SEND) | ||||||||
| Ectromelia | ||||||||
|
Hantaviruses (Hantaan & Seoul) |
||||||||
|
Lymphocytic choriomeningitis virus (LCMV) |
||||||||
|
Pinworms (Syphacia obvelata, Syphacia muris, Aspiculuris tetraptera) |
||||||||
| Fur Mites (Myocoptes, Myobia, Radfordia spp.) | ||||||||
| Spironucleus muris | ||||||||
| Entamoeba muris | ||||||||
| Tritrichomonas muris | ||||||||
| Cryptosporidium spp. | ||||||||
| Giardia spp. | ||||||||
| Demodex | ||||||||
| Ornithonyssus | ||||||||
| Chilomastix spp. | ||||||||
| Eimeria sp. | ||||||||
| Hexamastix muris |
Rat Opti-XXpress
F - Feces | FS - Fur Swabs | DOS - Dry Oral Swabs
(Long: 125251427)
| Prevalent | Basic | Comprehensive | Global | FELASA Quarterly | FELASA Annual | |
|---|---|---|---|---|---|---|
| Test Code | 21-00277 | 21-00278 | 21-00279 | 21-00280 | 21-00353 | 21-00354 |
| Sample Type | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS | F, DOS, FS |
| Rodentibacter heylii/pneumotropicus | ||||||
| Mycoplasma pulmonis | ||||||
| Staphylococcus aureus | ||||||
| Streptococcus β-hemolytic (Group A, B, C, G) | ||||||
| Bordetella bronchiseptica | ||||||
| Corynebacterium kutscheri | ||||||
| Streptobacillus moniliformis | ||||||
| Streptococcus pneumoniae | ||||||
| Filobacterium rodentium | ||||||
|
Helicobacter spp. H.bilis, H.ganmani, H.hepaticus H.mastomyrinus,H.rodentium, H.typhlonius |
||||||
| Klebsiella oxytoca | ||||||
| Klebsiella pneumoniae | ||||||
| Salmonella spp. | ||||||
| Clostridium piliforme | ||||||
| Pseudomonas aeruginosa | ||||||
| Campylobacter coli/jejuni | ||||||
| Proteus mirabilis | ||||||
| Staphylococcus xylosus | ||||||
| Pneumocystis spp. | ||||||
| Rat coronavirus (RCV)/Sialodacryoadenitis virus (SDAV) | ||||||
| Rat parvovirus (RPV) | ||||||
| Kilham’s rat virus (KRV) | ||||||
| Rat minute virus (RMV) | ||||||
| Toolan’s H-1 virus (H-1) | ||||||
| Rat theilovirus (RTV) | ||||||
| Boone cardiovirus (BCV) | ||||||
| Hantaan (HANT) | ||||||
| Mouse adenovirus 1 (MAV1) | ||||||
| Mouse adenovirus 2 (MAV2) | ||||||
| Reovirus 3 (REO3) | ||||||
| Pneumonia virus of mice (PVM) | ||||||
| Sendai virus (SEND) | ||||||
| Seoul virus | ||||||
| Rat polyomavirus 2 (RPyV2) | ||||||
| Pinworms (Syphacia obvelata, Syphacia muris, Aspiculuris tetraptera) | ||||||
| Fur Mites (Myocoptes, Myobia and Radfordia spp.) | ||||||
| Spironucleus muris | ||||||
| Entamoeba muris | ||||||
| Tritrichomonas muris | ||||||
| Cryptosporidium spp. | ||||||
| Giardia spp. | ||||||
| Demodex | ||||||
| Ornithonyssus | ||||||
| Chilomastix spp. | ||||||
| Hexamastix muris | ||||||
| Eimeria sp. |
Mouse Environmental Diagnostic Profiles
E - Environmental Sample
(Long: 125011579)
| Prevalent | Basic | Comprehensive | Global | FELASA Quarterly | FELASA Annual | Immunodeficient FELASA Quarterly | Immunodeficient FELASA Annual | |
|---|---|---|---|---|---|---|---|---|
| Test Code | 21-00273 | 21-00274 | 21-00275 | 21-00276 | 21-00349 | 21-00350 | 21-00351 | 21-00352 |
| Sample Type | E | E | E | E | E | E | E | E |
| Rodentibacter heylii/pneumotropicus | ||||||||
| Mycoplasma pulmonis | ||||||||
| Staphylococcus aureus | ||||||||
| Streptococcus β-hemolytic (Group A, B, C, G) | ||||||||
| Bordetella bronchiseptica | ||||||||
| Bordetella hinzii / pseudohinzii | ||||||||
| Corynebacterium kutscheri | ||||||||
| Streptobacillus moniliformis | ||||||||
| Streptococcus pneumoniae | ||||||||
| Filobacterium rodentium | ||||||||
|
Helicobacter spp. H.bilis, H.ganmani, H.hepaticus, H.mastomyrinus,H.rodentium, H.typhlonius |
||||||||
| Klebsiella oxytoca | ||||||||
| Klebsiella pneumoniae | ||||||||
| Salmonella spp. | ||||||||
| Citrobacter rodentium | ||||||||
| Clostridium piliforme | ||||||||
| Pseudomonas aeruginosa | ||||||||
| Campylobacter coli/jejuni | ||||||||
| Proteus mirabilis | ||||||||
| Corynebacterium bovis | ||||||||
| Corynebacterium spp. (HAC2) | ||||||||
| Staphylococcus xylosus | ||||||||
| Pneumocystis spp. | ||||||||
| Mouse hepatitis virus (MHV) | ||||||||
| Minute virus of mice (MVM) | ||||||||
| Mouse parvovirus (MPV1-5) | ||||||||
| Mouse norovirus (MNV) | ||||||||
| Theiler's murine encephalomyelitis virus (TMEV) | ||||||||
| Mouse rotavirus (MRV/EDIM) | ||||||||
| Mouse adenovirus 1 (MAV1) | ||||||||
| Mouse adenovirus 2 (MAV2) | ||||||||
| Mouse Kidney Parvovirus (MKPV) | ||||||||
| Reovirus 3 (REO3) | ||||||||
| Pneumonia virus of mice (PVM) | ||||||||
| Sendai virus (SEND) | ||||||||
| Ectromelia | ||||||||
| Hantaviruses (Hantaan & Seoul) | ||||||||
| Lymphocytic choriomeningitis virus (LCMV) | ||||||||
| Pinworms (Syphacia obvelata, Syphacia muris, Aspiculuris tetraptera) | ||||||||
| Fur Mites (Myocoptes, Myobia and Radfordia spp.) | ||||||||
| Spironucleus muris | ||||||||
| Entamoeba muris | ||||||||
| Tritrichomonas muris | ||||||||
| Cryptosporidium spp. | ||||||||
| Giardia spp. | ||||||||
| Demodex | ||||||||
| Ornithonyssus | ||||||||
| Chilomastix spp. | ||||||||
| Eimeria sp. | ||||||||
| Hexamastix muris |
Rat Environmental Diagnostic Profiles
E - Environmental Sample
(Long: 125012767)
| Prevalent | Basic | Comprehensive | Global | FELASA Quarterly | FELASA Annual | |
|---|---|---|---|---|---|---|
| Test Code | 21-00277 | 21-00278 | 21-00279 | 21-00280 | 21-00353 | 21-00354 |
| Sample Type | E | E | E | E | E | E |
| Rodentibacter heylii/pneumotropicus | ||||||
| Mycoplasma pulmonis | ||||||
| Staphylococcus aureus | ||||||
| Streptococcus β-hemolytic (Group A, B, C, G) | ||||||
| Bordetella bronchiseptica | ||||||
| Corynebacterium kutscheri | ||||||
| Streptobacillus moniliformis | ||||||
| Streptococcus pneumoniae | ||||||
| Filobacterium rodentium | ||||||
|
Helicobacter spp. H.bilis, H.ganmani, H.hepaticus H.mastomyrinus,H.rodentium, H.typhlonius |
||||||
| Klebsiella oxytoca | ||||||
| Klebsiella pneumoniae | ||||||
| Salmonella spp. | ||||||
| Clostridium piliforme | ||||||
| Pseudomonas aeruginosa | ||||||
| Campylobacter coli/jejuni | ||||||
| Proteus mirabilis | ||||||
| Staphylococcus xylosus | ||||||
| Pneumocystis spp. | ||||||
| Rat coronavirus (RCV)/Sialodacryoadenitis virus (SDAV) | ||||||
| Rat parvovirus (RPV) | ||||||
| Kilham’s rat virus (KRV) | ||||||
| Rat minute virus (RMV) | ||||||
| Toolan’s H-1 virus (H-1) | ||||||
| Rat theilovirus (RTV) | ||||||
| Boone cardiovirus (BCV) | ||||||
| Hantaan (HANT) | ||||||
| Mouse adenovirus 1 (MAV1) | ||||||
| Mouse adenovirus 2 (MAV2) | ||||||
| Reovirus 3 (REO3) | ||||||
| Pneumonia virus of mice (PVM) | ||||||
| Sendai virus (SEND) | ||||||
| Seoul virus | ||||||
| Rat polyomavirus 2 (RPyV2) | ||||||
| Pinworms (Syphacia obvelata, Syphacia muris, Aspiculuris tetraptera) | ||||||
| Fur Mites (Myocoptes, Myobia and Radfordia spp.) | ||||||
| Spironucleus muris | ||||||
| Entamoeba muris | ||||||
| Tritrichomonas muris | ||||||
| Cryptosporidium spp. | ||||||
| Giardia spp. | ||||||
| Demodex | ||||||
| Ornithonyssus | ||||||
| Chilomastix spp. | ||||||
| Hexamastix muris | ||||||
| Eimeria sp. |
Mouse and Rat
F - Feces | DOS - Dry Oral Swabs | FS - Fur Swab | E - Environmental
(Long: 103196675)
| Agent | Sample Type | Test Code |
|---|---|---|
|
Parvovirus Mouse PCR MPV 1-5, MVM |
F or E | 21-00002 |
|
Parvovirus Plus Mouse PCR MPV 1-5, MVM, MKPV |
F or E | 21-00272 |
|
Fecal A Mouse PCR MPV 1-5, MVM, MHV, MNV, Helicobacter spp., Pinworms |
F | 21-00025 |
|
Fecal B Mouse PCR MPV 1-5, MVM, MHV, MNV, TMEV, EDIM, Helicobacter spp., Pinworms |
F | 21-00026 |
|
Fecal C Mouse PCR MPV 1-5, MVM, MHV, MNV, TMEV, EDIM, Helicobacter spp., Pinworms, Citrobacter rodentium, Clostridium piliforme, Salmonella spp., Klebsiella oxytoca, Klebsiella pneumoniae, Pseudomonas aeruginosa, Entamoeba muris, Giardia muris, Spironucleus muris, Tritrichomonas muris, Chilomastix spp. |
F | 21-00027 |
|
Parvovirus Rat PCR RPV, RMV, KRV, H-1 |
F or E | 21-00003 |
|
Fecal Rat PCR RPV, RMV, KRV, H-1, RTV, Helicobacter spp., Pinworms |
F | 21-00028 |
|
EDX Parasite PCR Fur mites, Pinworms, Spironucleus muris, Entamoeba muris, Tritrichomonas muris, Giardia spp., Ornithonyssus sp., Demodex musculi |
E | 21-00153 |
|
EDx Primary Fur mites, Pinworms, Spironucleus muris, Entamoeba muris, Tritrichomonas muris, Giardia spp, Helicobacter spp., H.bilis, H.hepaticus, H.rodentium, H.typhlonius, H.ganmani, H.mastomyrinus, Rodentibacter heylii / pneumotropicus |
E | 21-00155 |
|
Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) Panel† |
F or DOS | 20-00417 |
|
Helicobacter PCR Helicobacter spp., H.bilis, H.hepaticus, H.rodentium, H.typhlonius, H.ganmani, H.mastomyrinus |
F or E | 21-00001 |
|
Pinworm / Fur Mite PCR Syphacia obvelata, Syphacia muris, Aspiculuris tetraptera, Myocoptes, Myobia and Radfordia spp. |
F or E | 21-00029 |
|
Pinworm / Fur Mite / Helicobacter spp. PCR Syphacia obvelata, Syphacia muris, Aspiculuris tetraptera, Myocoptes, Myobia and Radfordia spp., Helicobacter spp., H.bilis, H.hepaticus, H.rodentium, H.typhlonius, H.ganmani, H.mastomyrinus |
F or E | 21-00219 |
|
Protozoa PCR Entamoeba muris, Giardia muris, Spironucleus muris, Tritrichomonas muris, Chilomastix spp. |
F or E | 21-00021 |
|
Skin PCR Fur mites, Dermatophytes, Demodex musculi, Ornithonyssus spp., Staphylococcus aureus, Staphylococcus xylosus, Corynebacterium bovis, Corynebacterium spp. (HAC2) |
PS | 21-00270 |
|
Dermatophytes PCR Microsporum spp., Trichophyton spp. |
Skin Brush | 20-00314 |
|
Opportunistic Bacteria Mouse PCR Klebsiella oxytoca, Klebsiella pneumoniae, Pseudomonas aeruginosa, Proteus mirabilis, Staphylococcus aureus, Bordetella bronchiseptica, Filobacterium rodentium |
F, DOS or E | 21-00343 |
|
Opportunistic Bacteria Rat PCR Klebsiella oxytoca, Klebsiella pneumoniae, Pseudomonas aeruginosa, Proteus mirabilis, Staphylococcus aureus, Bordetella bronchiseptica, Corynebacterium kutscheri |
F, DOS or E | 21-00344 |
Other Species Testing
F - Feces | DOS - Dry Oral Swabs | FS - Fur Swab | E - Environmental
(Long: 103196681)
| Sample Type | Test Code | |
|---|---|---|
|
Opportunistic Bacteria Guinea Pig PCR Klebsiella oxytoca, Klebsiella pneumoniae, Proteus mirabilis, Pseudomonas aeruginosa, Staphylococcus aureus |
F, DOS or E | 21-00336 |
|
Opportunistic Bacteria Hamster PCR Klebsiella oxytoca, Klebsiella pneumoniae, Proteus mirabilis, Pseudomonas aeruginosa, Staphylococcus aureus |
F, DOS or E | 21-00330 |
|
Acute Disease Guinea Pig PCR GPAdV, Bordetella bronchiseptic, Salmonella sp., β-hemolytic Streptococci Group C |
F, DOS | 21-00337 |
|
Diarrhea Hamster PCR Clostridium perfringens (Alpha Toxin & Enterotoxin), Clostridium difficile (Toxin A & Toxin B), Helicobacter spp. (H. bilis & H. hepaticus), Salmonella sp., Lawsonia intracellularis, Campylobacter coli/jejuni., Cryptosprodium spp. |
F | 21-00331 |
|
Respiratory Hamster PCR Rodentibacter heylii/pneumotropicus, Streptococcus pneumoniae, β-hemolytics Streptococci Group B, Mycoplasma pulmonis, Bordetella bronchiseptica, Sendai virus. |
DOS or F | 21-00332 |
NHP PCR Testing
F - Feces
(Long: 103196684)
| Agent | Sample Type | Helicobacter | Basic | Comprehensive |
|---|---|---|---|---|
| Test Code | 82-00019 | 82-00181 | 82-00184 | |
| Helicobacter spp., H.cinaedi/canicola, H.macacae, H.pylori, H.suis | F | |||
| Campylobacter coli | F | |||
| Campylobacter jejuni | F | |||
| Salmonella spp. | F | |||
| Shigella spp. | F | |||
| Yersinia enterocolitica | F | |||
| Yersinia pseudotuberculosis | F | |||
| Clostridium difficile toxin A | F | |||
| Clostridium difficile toxin B | F | |||
| Clostridium perfringens alpha toxin | F | |||
| Clostridium perfringens enterotoxin | F | |||
| Clostridium piliforme | F | |||
| Cryptosporidium spp. | F | |||
| Entamoeba histolytica/nuttalli | F | |||
| Giardia spp. | F | |||
| Lawsonia intracellularis | F |
Individual PCR Assays
(Long: 125058943)
| Sample Type | Species | Test Code | |
|---|---|---|---|
| Boone cardiovirus (BCV) | Feces, environmental | Rat | 20-00148 |
| Bordetella bronchiseptica | Feces, environmental, oral swab, trachea | Mouse, Guinea Pig, Rat, Rabbit, Hamster, Chinchilla | 20-00120 |
| Bordetella hinzii / pseudohinzii | Feces, environmental, oral swab, trachea | Mouse, Chinchilla | 20-00176 |
| Burkholderia gladioli | Feces, environmental, oral swab | Mouse, Rat | 20-00456 |
| Campylobacter coli | Feces, Environmental | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00116 |
| Campylobacter jejeuni | Feces, Environmental | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00091 |
| Chilomastix spp. | Feces, environmental | Mouse, Rat | 20-00341 |
| Chlamydia muridarum | Feces, environmental | Mouse | 20-00470 |
| Cilia-associated respiratory bacillus (CARB) | Feces, environmental, oral swab, trachea | Rabbit | 20-00043 |
| Citrobacter rodentium | Feces, environmental, colon | Mouse, Rabbit | 20-00005 |
| Clostridium difficile Toxin A | Feces, environmental | Rabbit | 20-00098 |
| Clostridium difficile Toxin B | Feces, environmental | Rabbit | 20-00101 |
| Clostridium perfrigens alpha toxin | Feces, environmental | Chinchilla | 20-00107 |
| Clostridium perfrigens enterotoxin | Feces, environmental | Chinchilla | 20-00340 |
| Clostridium piliforme (Tyzzer’s disease) | Feces, environmental | Mouse, Rat, Rabbit | 20-00007 |
| Corynebacterium bovis | Feces, environmental, fur swab | Mouse, Rat | 20-00096 |
| Corynebacterium kutscheri | Feces, environmental, oral swab | Mouse, Hamster, Rat | 20-00042 |
| Corynebacterium spp. (HAC2) | Feces, environmental, fur swab | Mouse | 20-00332 |
| Cryptosporidium muris | Feces, environmental | Mouse | 20-00474 |
| Cryptosporidium parvum/tyzzeri | Feces, environmental | Mouse | 20-00475 |
| Cryptosporidium spp. | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster, Rabbit, Chinchilla | 20-00350 |
| Demodex musculi | Pelt swab, environmental, feces | Mouse, Rat | 20-00318 |
| Dermatophytes (Microsporum sp., Trichophyton sp.) | Pelt swab, environmental, feces | Mouse, Rat, Guinea Pid, Hamster, Rabbit, Chinchilla | 20-00314 |
| Ectromelia virus (ECTRO) | Feces, environmental, skin lesion | Mouse | 20-00004 |
| Eimeria spp. | Feces, environmental | Mouse, Rat, Rabbit, Chinchilla | 20-00409 |
| Encephalitozoon cuniculi | Feces, kidney | Mouse, Guinea Pig, Hamster, Rabbit, Rat | 20-00051 |
| Entamoeba muris | Feces, environmental | Mouse, Rat, Hamster | 20-00142 |
| Filobacterium rodentium | Feces, Environmental, oral swab, trachea | Mouse, Rat, Hamster | 20-00006 |
| Fure mites (Myocoptes, Myoba, Radfordia) | Feces, environmental, pelt swab | Mouse, Rat, Chinchilla | 20-00124 |
| Giardia muris | Feces, environmental | Mouse, Rat, Hamster | 20-00090 |
| Giardia spp. | Feces, environmental | Chinchilla, Rabbit | 20-00354 |
| Guinea pig adenovirus (GPAV) | Feces, environmental, oral swab, lung | Guinea Pig | 20-00013 |
| Guinea pig cytomegalovirus (GPCMV) | Feces, spleen, salivary gland | Guinea Pig | 20-00015 |
| Hamster parvovirus (HaPV) | Feces, mesenteric lymph nodes | Hamster | 20-00012 |
| Hamster polyomavirus (HaPyV) | Feces, environmental, lesioned organs | Hamster | 20-00186 |
| Hantaan virus (HANT) | Feces, environmental, kidney | Mouse, Rat, Guinea Pig, Hamster | 20-00011 |
| Helicobacter bilis | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster | 21-00001 |
| Helicobacter ganmani | Feces, environmental | Mouse, Rat | 21-00001 |
| Helicobacter hepaticus | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster | 21-00001 |
| Helicobacter mastomyrinus | Feces, environmental | Mouse, Rat | 21-00001 |
| Helicobacter rodentium | Feces, environmental | Mouse, Rat | 21-00001 |
| Helicobacter spp. | Feces, environmental | Mouse, Guinea Pig, hamster, abbit, Rat | 21-00001 |
| Helicobacter typhlonius | Feces, environmental | Mouse, Rat | 21-00001 |
| Hexamastix muris | Feces, environmental | Mouse, Rat | 20-00534 |
| Hymenolepis diminuta | Feces, environmental | Mouse, Rat | 20-00169 |
| K virus (Mouse pneumotropic virus) | Feces, environmental, mesenteric lymph nodes | Mouse | 20-00016 |
| Kilham’s rat virus (KRV) | Feces, environmental, mesenteric lymph nodes, spleen | Rat | 20-00017 |
| Klebsiella oxytoca | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster | 20-00041 |
| Klebsiella pneumoniae | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster | 20-00040 |
| Lactate dehydrogenase-elevating virus (LDEV) | Feces, environmental, serum, spleen | Mouse | 20-00020 |
| Lawsonia intracellularis | Feces, environmental | Mouse, Guinea Pig, Hamster, Rat, Rabbit | 20-00082 |
| Leptospira spp. | Feces, environmental | Mouse, Rat | 20-00455 |
| Lymphocytic choriomeningitis virus (LCMV) | Feces, environmental, kidney | Mouse, Rat, Guinea Pig, Hamster | 20-00018 |
| Minute virus of mice (MVM) | Feces, environmental, mesenteric lymph nodes, spleen | Mouse | 20-00025 |
| Mouse adenovirus 1 (MAV1) | Feces, environmental, mesenteric lymph nodes | Mouse, Rat | 20-00402 |
| Mouse adenovirus 2 (MAV2) | Feces, environmental, intestine | Mouse, Rat | 20-00404 |
| Mouse cytomegalovirus (MCMV) | Feces, environmental, spleen, salivary gland | Mouse | 20-00021 |
| Mouse hepatitis virus (MHV) | Feces, environmental, mesenteric lymph nodes | Mouse | 20-00086 |
| Mouse Kidney Parvovirus (MKPV) | Feces, environmental, kidney | Mouse | 20-00388 |
| Mouse parvovirus (MPV1-5) | Feces, environmental, mesenteric lymph nodes, spleen | Mouse | 20-00001 |
| Mouse rotavirus (EDIM) | Feces, environmental | Mouse | 20-00008 |
| Mouse thymic virus (MTV) | Feces, environmental, oral swab, salivary gland | Mouse | 20-00024 |
| Murine astrovirus 1 (MuAstV1) | Feces, environmental | Mouse | 20-00170 |
| Murine norovirus (MNV) | Feces, environmental | Mouse | 20-00023 |
| Murine polyomavirus | Feces, environmental, skin | Mouse | 20-00026 |
| Mycoplasma pulmonis | Feces, environmental, oral swab | Mouse, Rat | 20-00095 |
| Myxomatosis (MYXO) | Feces | Rabbit | Call |
| Ornithonyssus spp. | Pelt swab, environmental, feces | Mouse, Rat | 20-00307 |
| Parvovirus mouse (MPV1-5, MVM) | Feces, environmenta | Mouse | 21-00002 |
| Parvoviruses Rat (RPV, RMV, KRV, H-1) | Feces, environmenta | Rat | 21-00003 |
| Pasteurella multocida | Feces, environmental, oral swab | Rat, Guinea, Hamster, Rabbit, Chinchilla | 20-00172 |
| Pinworms (Aspiculuris tetraptera, Syphacia muris, Syphacia obvelata) | Feces, environmental | Mouse, Rat, Chinchilla | 20-00115 |
| Pneumocystis spp. | Feces, environmental, oral swab, lung | Mouse, Rat | 20-00345 |
| Pneumonia virus of mice (PVM) | Feces, environmental, oral swab, lung | Mouse, Rat | 20-00027 |
| Polyplax serrata | Environmental, Fur swab | Mouse | 20-00532 |
| Polyplax spinulosa | Environmental, Fur swab | Rat | 20-00531 |
| Proteus mirabilis | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster, Rabbit | 20-00369 |
| Pseudomonas aeruginosa | Feces, environmental | Mouse, Rat, Chinchilla | 20-00371 |
| Rat coronavirus (RCV)/ Sialodacryoadenitis virus (SDAV) | Feces, environmental, oral swab, Harderian gland | Rat | 20-00029 |
| Rat cytomegalovirus (RCMV) | Feces, environmental, oral swab, salivary gland | Rat | 20-00028 |
| Rat minute virus (RMV) | Feces, environmental, mesenteric lymph nodes, spleen | Rat | 20-00031 |
| Rat parvovirus (RPV) | Feces, environmental, mesenteric lymph nodes, spleen | Rat | 20-00032 |
| Rat polyomavirus 2 (RPyV2) | Feces, environmental, oral swab | Rat | 20-00315 |
| Rat rotavirus (IDIR) | Feces, environmental | Rat | 20-00184 |
| Rat theilovirus (RTV) | Feces, environmental, intestine | Rat | 20-00037 |
| Reovirus type 3 (REO3) | Feces, environmental, intestine | Mouse, Rat, Guinea Pig, Hamster | 20-00030 |
| Rodentibacter heylii / pneumotropicus | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig, Hamster, Rabbit, Chinchilla | 20-00171 |
| Rodentolepis nana | Feces, environmental | Mouse, Rat, Chinchilla | 20-00163 |
| Salmonella spp. | Feces, environmental | Mouse, Rat, Guinea Pig, Hamster, Rabbit, Chinchilla | 20-00033 |
| Segmented filamentous bacterium | Feces, environmental | Mouse | 20-00144 |
| Sendai virus (SEND) | Feces, environmental, oral swab, lung | Mouse, Rat, Guinea Pig, Hamster | 20-00014 |
| Seoul virus (SEOV) | Feces, environmental, kidney | Mouse, Rat | 20-00495 |
| Severe acute respiratory syndrome coronavirus 2 (SARS-CoV 2) | Feces, environmental | Mouse | 20-00417 |
| Sin Nombre virus (SNV) | Feces, environmental, kidney | Mouse | 20-00394 |
| Spironucleus muris | Feces, environmental | Mouse, Rat, Hamster | 20-00092 |
| Staphylococcus aureus | Feces, environmental, oral swab, fur swab/skin swab | Mouse, Rat, Chinchilla | 20-00034 |
| Staphylococcus xylosus | Feces, environmental, oral swab, fur swab/skin swab | Mouse, Rat | 20-00378 |
| Streptobacillus moniliformis | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig | 20-00035 |
| Streptococcus agalactiae (Group B) | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00410 |
| Streptococcus canis (Group G) | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00489 |
| Streptococcus equi subsp. zooepidemicus (Group C) | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00457 |
| Streptococcus pneumoniae | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00134 |
| Streptococcus pyogenes (Group A) | Feces, environmental, oral swab | Mouse, Rat, Guinea Pig, Hamster, Chinchilla | 20-00493 |
| Syphacia muris (Pinworms) | Feces, environmental | Mouse, Rat, Chinchilla | 20-00115 |
| Theiler’s murine encephalomyelitis virus (TMEV) | Feces, environmental | Mouse | 20-00038 |
| Toolan’s H-1 virus (H-1) | Feces, environmental, mesenteric lymph nodes, spleen | Rat | 20-00010 |
| Treponema paraluiscuniculi | Genital swab | Rabbit | 20-00461 |
| Tritrichomonas muris | Feces, environmental | Mouse, Rat | 20-00154 |
| Yersinia enterocolitica | Feces, environmental | Chinchilla | 20-00165 |
| Yersinia pseudotuberculosis | Feces, environmental | Chinchilla | 20-00136 |
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